rexo1 protein (Takifugu rubripes) - STRING interaction network

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Score

rexo1

REX1, RNA exonuclease 1 homolog. (1248 aa)

Predicted Functional Partners:

rexo2

0.948

PAN3

0.678

exosc10

0.658

ddx51

0.621

c1d

0.616

pcna

0.606

wdr61

0.584

ENSTRUP00000086673

0.576

gmps

0.528

znf276

0.520

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000086673	gmps	ENSTRUP00000086673	ENSTRUP00000066154	annotation not available	Guanine monophosphate synthase.	0.476
ENSTRUP00000086673	rexo1	ENSTRUP00000086673	ENSTRUP00000012490	annotation not available	REX1, RNA exonuclease 1 homolog.	0.576
PAN3	c1d	ENSTRUP00000014062	ENSTRUP00000031001	PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...]	C1D nuclear receptor corepressor.	0.540
PAN3	exosc10	ENSTRUP00000014062	ENSTRUP00000031620	PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...]	Exosome component 10.	0.549
PAN3	rexo1	ENSTRUP00000014062	ENSTRUP00000012490	PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...]	REX1, RNA exonuclease 1 homolog.	0.678
c1d	PAN3	ENSTRUP00000031001	ENSTRUP00000014062	C1D nuclear receptor corepressor.	PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...]	0.540
c1d	exosc10	ENSTRUP00000031001	ENSTRUP00000031620	C1D nuclear receptor corepressor.	Exosome component 10.	0.999
c1d	rexo1	ENSTRUP00000031001	ENSTRUP00000012490	C1D nuclear receptor corepressor.	REX1, RNA exonuclease 1 homolog.	0.616
c1d	wdr61	ENSTRUP00000031001	ENSTRUP00000066993	C1D nuclear receptor corepressor.	WD repeat domain 61.	0.415
ddx51	exosc10	ENSTRUP00000032087	ENSTRUP00000031620	DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family.	Exosome component 10.	0.418
ddx51	gmps	ENSTRUP00000032087	ENSTRUP00000066154	DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family.	Guanine monophosphate synthase.	0.407
ddx51	rexo1	ENSTRUP00000032087	ENSTRUP00000012490	DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family.	REX1, RNA exonuclease 1 homolog.	0.621
ddx51	wdr61	ENSTRUP00000032087	ENSTRUP00000066993	DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family.	WD repeat domain 61.	0.761
exosc10	PAN3	ENSTRUP00000031620	ENSTRUP00000014062	Exosome component 10.	PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...]	0.549
exosc10	c1d	ENSTRUP00000031620	ENSTRUP00000031001	Exosome component 10.	C1D nuclear receptor corepressor.	0.999
exosc10	ddx51	ENSTRUP00000031620	ENSTRUP00000032087	Exosome component 10.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family.	0.418
exosc10	rexo1	ENSTRUP00000031620	ENSTRUP00000012490	Exosome component 10.	REX1, RNA exonuclease 1 homolog.	0.658
exosc10	rexo2	ENSTRUP00000031620	ENSTRUP00000052207	Exosome component 10.	Small fragment nuclease.	0.423
exosc10	wdr61	ENSTRUP00000031620	ENSTRUP00000066993	Exosome component 10.	WD repeat domain 61.	0.516
gmps	ENSTRUP00000086673	ENSTRUP00000066154	ENSTRUP00000086673	Guanine monophosphate synthase.	annotation not available	0.476