STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
klhdc8bKelch domain containing 8B. (359 aa)    
Predicted Functional Partners:
cct5
Chaperonin containing TCP1, subunit 5 (epsilon).
    
   0.862
cct3
T-complex protein 1 subunit gamma.
    
 
 0.794
cct7
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
    
   0.788
pex7
Peroxisomal biogenesis factor 7.
    
   0.725
rrp36
Ribosomal RNA processing 36.
      
 0.723
togaram1
Uncharacterized protein.
      
 0.679
kbtbd12
Kelch repeat and BTB (POZ) domain containing 12.
    
 0.659
txndc9
Thioredoxin domain containing 9.
    
   0.643
TMEM43
Uncharacterized protein.
      
 0.622
xpc
Xeroderma pigmentosum, complementation group C.
      
 0.610
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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