STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
emc4ER membrane protein complex subunit 4; Belongs to the EMC4 family. (196 aa)    
Predicted Functional Partners:
emc8
ER membrane protein complex subunit 8.
   
 
 0.993
emc7
ER membrane protein complex subunit 7.
   
 
 0.989
H2RPX4_TAKRU
ER membrane protein complex subunit 6.
   
 
 0.988
mmgt1
Membrane magnesium transporter 1.
   
 
 0.986
emc1
ER membrane protein complex subunit 1.
    
 
 0.984
LOC101078521
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
   
 
 0.970
emc3
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
   
 
 0.970
emc10
ER membrane protein complex subunit 10.
   
 
 0.946
ENSTRUP00000074317
ER membrane protein complex subunit 10.
   
 
 0.946
dctn4
Dynactin 4.
    
 
 0.918
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.