Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101072922SRY-box transcription factor 19b. (300 aa)    
Predicted Functional Partners:
LOC101074260
POU domain protein.
    
 0.919
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.724
sall4
Spalt-like transcription factor 4.
   
 0.722
sp5
Sp5 transcription factor a.
   
 0.590
LOC101069608
Bone morphogenetic protein 16.
    
 0.587
LOC101076503
Nanog homeobox.
      
 0.581
LOC101075116
Lin-28 homolog A.
    
 0.559
prdm14
PR domain containing 14.
    
 0.531
LOC101077107
Fragile X mental retardation, autosomal homolog 2.
      
 0.528
fgf8
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
     
 0.524
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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