Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
asb10Ankyrin repeat and SOCS box containing 10. (437 aa)    
Predicted Functional Partners:
LOC101077156
Ankyrin repeat and SOCS box-containing 12a.
  
 
 0.761
asb12
Ankyrin repeat and SOCS box-containing 12b.
  
 
 0.749
asb1
Ankyrin repeat and SOCS box containing 1.
  
  
0.635
lrrc20
Leucine rich repeat containing 20.
   
 0.626
asb6
Ankyrin repeat and SOCS box containing 6.
  
  
 0.561
cul5
Cullin 5a; Belongs to the cullin family.
    
 0.559
cops8
COP9 signalosome subunit 8.
    
 0.557
IQCA1L
ATPase_AAA_core domain-containing protein.
 
  
 0.553
LRRC30
Leucine rich repeat containing 30.
   
 0.552
commd8
COMM domain containing 8.
   
  0.549
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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