STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asb10Ankyrin repeat and SOCS box containing 10. (437 aa)    
Predicted Functional Partners:
asb12
Ankyrin repeat and SOCS box-containing 12b.
  
 
 0.653
LOC101077156
Ankyrin repeat and SOCS box-containing 12a.
  
 
 0.642
LOC101063108
Ankyrin repeat and SOCS box containing 3.
  
  
 0.515
cdkn2d
Cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4).
  
     0.501
nfkbia
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.
  
  
  0.499
ankrd39
Ankyrin repeat domain 39.
  
     0.493
rfxank
Regulatory factor X-associated ankyrin-containing protein.
  
     0.491
ENSTRUP00000017762
Ankyrin repeat and death domain containing 1B.
  
 
  0.486
LOC101068711
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.
  
  
  0.486
ENSTRUP00000059731
annotation not available
  
  
  0.486
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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