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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101064531Jade family PHD finger 1. (868 aa)    
Predicted Functional Partners:
meaf6
MYST/Esa1-associated factor 6.
    
 0.811
larp1b
La ribonucleoprotein domain family, member 1B.
      
 0.694
nenf
Neudesin neurotrophic factor; Belongs to the cytochrome b5 family.
      
 0.679
camkk1
Calcium/calmodulin-dependent protein kinase kinase 1, alpha a.
   
  
 0.679
ing4
Inhibitor of growth protein.
    
 0.660
ENSTRUP00000086668
Inhibitor of growth family, member 4.
    
 0.660
ing5
Inhibitor of growth family, member 5a.
    
 0.636
LOC101073735
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.496
kat7
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.496
kat5
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.496
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.