Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101066020HID1 domain containing b. (796 aa)    
Predicted Functional Partners:
gle1
GLE1 RNA export mediator.
   
 
 0.757
NUP54
Nucleoporin 54.
   
 
 0.705
nup133
Nucleoporin 133.
   
 
 0.698
nup155
Nucleoporin 153.
    
 
 0.692
usp40
Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family.
    
 
 0.673
usp7
Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family.
    
 
 0.673
rae1
Ribonucleic acid export 1.
    
 
 0.665
nxf1
Zgc:153681.
    
 
 0.654
nup98
Nucleoporin 98.
    
 
 0.577
otop2
Otopetrin 2.
      
 0.570
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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