STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tcimTranscriptional and immune response regulator a. (100 aa)    
Predicted Functional Partners:
gpr119
G protein-coupled receptor 119; Belongs to the G-protein coupled receptor 1 family.
  
   
 0.766
LOC101069239
U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.
      
 0.593
sord
Sorbitol dehydrogenase.
      
 0.545
ccnb3
Cyclin B3; Belongs to the cyclin family.
      
 0.521
prpf40a
PRP40 pre-mRNA processing factor 40 homolog A.
      
 0.516
LOC101068635
ALG13 UDP-N-acetylglucosaminyltransferase subunit.
      
 0.498
H2TS82_TAKRU
Claudin 23a.
  
   
 0.492
ENSTRUP00000074040
annotation not available
      
 0.477
pik3ip1
Phosphoinositide-3-kinase interacting protein 1.
      
 0.476
LOC101079526
Endothelin 2.
      
 0.467
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.