Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101077108Haloacid dehalogenase like hydrolase domain containing 5. (439 aa)    
Predicted Functional Partners:
LOC101072434
PNP_UDP_1 domain-containing protein.
    
 0.600
LOC101070083
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
 0.586
tceanc2
Uncharacterized protein.
      
 0.511
hspd1
Heat shock 60 protein 1; Belongs to the chaperonin (HSP60) family.
  
   0.496
LOC101079033
Zgc:101810; Belongs to the actin family.
    
 
 0.495
asrgl1
Asparaginase like 1.
      
 0.486
nedd1
NEDD1 gamma-tubulin ring complex targeting factor.
      
 0.482
blm
BLM RecQ like helicase.
    
 
 0.476
actr2
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
    
 
 0.462
LOC105416628
Sialic acid-binding Ig-like lectin 14.
      
 0.450
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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