Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RAP1GDS1Rap1 GTPase-GDP dissociation stimulator 1. (607 aa)    
Predicted Functional Partners:
rasl10a
RAS-like, family 10, member A.
    
  0.660
LOC101071850
PH domain-containing protein.
    
   0.592
dnal1
Dynein, axonemal, light chain 1.
    
   0.571
diras1
DIRAS family, GTP-binding RAS-like 1b.
    
 0.569
fbxl4
F-box and leucine-rich repeat protein 4.
      
 0.512
stpg2
Sperm-tail PG-rich repeat containing 2.
      
 0.500
RAC1
Uncharacterized protein.
    
  0.491
LOC101067160
Rac family small GTPase 1b.
    
  0.491
ENSTRUP00000064457
Ras-related C3 botulinum toxin substrate 3 isoform X1.
    
  0.491
rac2
Rac family small GTPase 2.
    
  0.491
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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