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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ankrd9Ankyrin repeat domain 9. (281 aa)    
Predicted Functional Partners:
kctd9
Potassium channel tetramerization domain containing 9a.
      
 0.754
npy8br
Npy8br protein; Belongs to the G-protein coupled receptor 1 family.
    
 0.682
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.607
commd8
COMM domain containing 8.
   
  0.589
cul5
Cullin 5a; Belongs to the cullin family.
    
 0.585
rnf7
Ring finger protein 7.
    
  0.583
commd1
Copper metabolism (Murr1) domain containing 1.
    
  0.578
LOC101070359
COMM domain containing 4.
    
 0.572
commd2
COMM domain containing 2.
    
  0.562
commd9
COMM domain containing 9.
    
  0.562
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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