Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
H2SK21_TAKRUUncharacterized protein. (364 aa)    
Predicted Functional Partners:
ugcg
UDP-glucose ceramide glucosyltransferase.
      
 0.550
lyz
Lysozyme C; Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents.
    
 0.500
prelp
Proline/arginine-rich end leucine-rich repeat protein.
     
 0.499
lum
Lumican.
     
  0.473
zswim5
Zinc finger, SWIM-type containing 5.
   
  
 0.457
pcsk2
Proprotein convertase subtilisin/kexin type 2; Belongs to the peptidase S8 family.
      
 0.435
bgn
Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.
     
 0.434
LOC115246761
Asporin.
     
 0.434
LOC101066088
DP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, like.
     
  0.423
b4galt2
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2.
     
  0.423
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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