STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2SK46_TAKRUFOP_dimer domain-containing protein. (251 aa)    
Predicted Functional Partners:
Cep350
Centrosomal protein 350.
    
 
 0.971
cep19
Centrosomal protein 19.
    
 
 0.964
ppp2r3c
Protein phosphatase 2, regulatory subunit B'', gamma.
    
 
 0.951
cep78
Uncharacterized protein.
    
   0.888
LOC101076920
Uncharacterized protein.
    
   0.855
PACS1
Phosphofurin acidic cluster sorting protein 1a.
    
   0.855
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
    
 
 0.826
rabl2b
RAB, member of RAS oncogene family-like 2.
   
 0.820
ppp2ca
Serine/threonine-protein phosphatase.
    
 
 0.777
ppp2cb
Serine/threonine-protein phosphatase.
    
 
 0.777
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.