Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
LOC115247556Stromal cell-derived factor 2-like 1. (218 aa)    
Predicted Functional Partners:
dnajb11
DnaJ heat shock protein family (Hsp40) member B11.
   
 
 0.853
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
   
 
 0.778
top3b
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
     
 0.720
creld2
Cysteine-rich with EGF-like domains 2.
   
 
 0.659
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
 
 0.638
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 
 0.604
cdc42se2
CDC42 small effector 2.
   
 
 0.547
LOC101077110
Sorting nexin 1a.
    
 
 0.534
snx2
Sorting nexin 2.
    
 
 0.534
manf
Mesencephalic astrocyte-derived neurotrophic factor.
   
  
 0.530
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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