STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101069254Selenophosphate synthetase 2. (416 aa)    
Predicted Functional Partners:
scly
Selenocysteine lyase.
   
 0.973
LOC101068545
Thioredoxin reductase 3.
  
 
 0.938
txnrd2
Thioredoxin reductase 2, tandem duplicate 1.
  
 
 0.937
sephs1
Selenophosphate synthetase 1.
  
  
 
0.901
PSTK
Phosphoseryl-tRNA kinase.
      
 0.833
rps24
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
 
    
 0.667
eefsec
Eukaryotic elongation factor, selenocysteine-tRNA-specific.
     
 0.666
MOCOS
Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.
    
 0.654
LOC101076853
Si:ch211-113e8.10.
    
   0.624
sars2
Seryl-tRNA synthetase 2, mitochondrial.
      
 0.623
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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