Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
serpinf1SERPIN domain-containing protein; Belongs to the serpin family. (435 aa)    
Predicted Functional Partners:
lrp6
Low density lipoprotein receptor-related protein 6.
    
 0.908
LOC101069468
Low density lipoprotein receptor-related protein 5.
    
 0.908
LOC101063935
Peptidylprolyl isomerase.
    
 
 0.791
crtap
Cartilage associated protein.
     
 0.732
p3h1
Prolyl 3-hydroxylase 1.
     
 0.716
ifitm5
Interferon induced transmembrane protein 5.
    
 0.696
TMEM38B
Transmembrane protein 38B.
      
 0.654
sec24d
SEC24 homolog D, COPII coat complex component.
     
 0.628
H2TG65_TAKRU
SERPIN domain-containing protein; Belongs to the serpin family.
  
  0.603
ENSTRUP00000058958
annotation not available
  
  0.592
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.