Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101074609Small G protein signaling modulator 2. (1066 aa)    
Predicted Functional Partners:
cetn3
Centrin 3.
    
   0.625
LOC101061582
Centrin, EF-hand protein, 2.
    
   0.524
LOC101071146
Centrin 4.
    
   0.524
pex1
Uncharacterized protein.
      
 0.497
glt1d1
Glycosyltransferase 1 domain containing 1.
      
 0.475
rundc1
RUN domain containing 1.
    
 
 0.468
ccdc186
Si:ch211-225b10.4.
      
 0.444
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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