STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101076970Guanylate cyclase activator 1d. (185 aa)    
Predicted Functional Partners:
gucy2f
Guanylate cyclase.
    
 0.838
LOC101072570
Guanylate cyclase.
    
 0.724
LOC101068241
Guanylate cyclase.
    
 0.724
LOC101072926
Cyclic nucleotide gated channel beta 3, tandem duplicate 2.
   
 0.641
ENSTRUP00000068713
Cyclic nucleotide-gated cation channel beta-3-like.
   
 0.641
LOC101074936
Si:dkey-44k1.5.
   
 0.641
LOC101067484
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
    
 0.640
gpatch3
G patch domain containing 3.
      
 0.627
ENSTRUP00000053937
Uncharacterized protein.
      
 0.612
LOC101069511
Retinol binding protein 4, like; Belongs to the calycin superfamily. Lipocalin family.
      
 0.570
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.