STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101064948TBC1 domain family, member 7. (317 aa)    
Predicted Functional Partners:
tsc2
TSC complex subunit 2.
    
 0.999
LOC101070860
TSC complex subunit 1b.
    
 0.992
LOC101063973
Ras homolog, mTORC1 binding like 1.
     
 0.968
H2UCW4_TAKRU
TSC complex subunit 1.
    
 0.966
rheb
Ras homolog, mTORC1 binding.
     
 0.957
AKT2
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.937
LOC101065438
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.937
LOC101073734
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.937
akt1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.937
LOC101071975
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.937
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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