PUF60 protein (Takifugu rubripes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

PUF60

Poly-U binding splicing factor b. (551 aa)

Predicted Functional Partners:

snrpf

0.786

sf3a2

0.783

sf3b1

0.729

snrpd3

0.725

fubp1

0.702

ENSTRUP00000080815

0.702

sf3a1

0.696

ENSTRUP00000061195

0.691

ENSTRUP00000074946

0.691

snrpd2

0.689

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000061195	PUF60	ENSTRUP00000061195	ENSTRUP00000013013	annotation not available	Poly-U binding splicing factor b.	0.691
ENSTRUP00000061195	sf3a1	ENSTRUP00000061195	ENSTRUP00000014866	annotation not available	Splicing factor 3a, subunit 1.	0.940
ENSTRUP00000061195	sf3b1	ENSTRUP00000061195	ENSTRUP00000039721	annotation not available	Splicing factor 3b, subunit 1.	0.912
ENSTRUP00000061195	snrpd2	ENSTRUP00000061195	ENSTRUP00000071624	annotation not available	Small nuclear ribonucleoprotein Sm D2.	0.893
ENSTRUP00000061195	snrpd3	ENSTRUP00000061195	ENSTRUP00000072646	annotation not available	Small nuclear ribonucleoprotein Sm D3.	0.891
ENSTRUP00000061195	snrpf	ENSTRUP00000061195	ENSTRUP00000038228	annotation not available	Small nuclear ribonucleoprotein polypeptide F.	0.856
ENSTRUP00000074946	PUF60	ENSTRUP00000074946	ENSTRUP00000013013	annotation not available	Poly-U binding splicing factor b.	0.691
ENSTRUP00000074946	sf3a1	ENSTRUP00000074946	ENSTRUP00000014866	annotation not available	Splicing factor 3a, subunit 1.	0.940
ENSTRUP00000074946	sf3b1	ENSTRUP00000074946	ENSTRUP00000039721	annotation not available	Splicing factor 3b, subunit 1.	0.912
ENSTRUP00000074946	snrpd2	ENSTRUP00000074946	ENSTRUP00000071624	annotation not available	Small nuclear ribonucleoprotein Sm D2.	0.893
ENSTRUP00000074946	snrpd3	ENSTRUP00000074946	ENSTRUP00000072646	annotation not available	Small nuclear ribonucleoprotein Sm D3.	0.891
ENSTRUP00000074946	snrpf	ENSTRUP00000074946	ENSTRUP00000038228	annotation not available	Small nuclear ribonucleoprotein polypeptide F.	0.856
ENSTRUP00000080815	PUF60	ENSTRUP00000080815	ENSTRUP00000013013	KH-type splicing regulatory protein.	Poly-U binding splicing factor b.	0.702
PUF60	ENSTRUP00000061195	ENSTRUP00000013013	ENSTRUP00000061195	Poly-U binding splicing factor b.	annotation not available	0.691
PUF60	ENSTRUP00000074946	ENSTRUP00000013013	ENSTRUP00000074946	Poly-U binding splicing factor b.	annotation not available	0.691
PUF60	ENSTRUP00000080815	ENSTRUP00000013013	ENSTRUP00000080815	Poly-U binding splicing factor b.	KH-type splicing regulatory protein.	0.702
PUF60	fubp1	ENSTRUP00000013013	ENSTRUP00000010975	Poly-U binding splicing factor b.	Far upstream element (FUSE) binding protein 1.	0.702
PUF60	sf3a1	ENSTRUP00000013013	ENSTRUP00000014866	Poly-U binding splicing factor b.	Splicing factor 3a, subunit 1.	0.696
PUF60	sf3a2	ENSTRUP00000013013	ENSTRUP00000022738	Poly-U binding splicing factor b.	Splicing factor 3a, subunit 2.	0.783
PUF60	sf3b1	ENSTRUP00000013013	ENSTRUP00000039721	Poly-U binding splicing factor b.	Splicing factor 3b, subunit 1.	0.729