Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115251127Coiled-coil domain-containing protein 77-like. (482 aa)    
Predicted Functional Partners:
c6h18orf54
Uncharacterized protein.
      
 0.647
LOC101068455
Nuclear envelope integral membrane protein 1.
   
  
 0.621
cep85
Centrosomal protein 85.
   
  
 0.592
ENSTRUP00000049371
Uncharacterized protein.
      
 0.591
letm2
Leucine zipper-EF-hand containing transmembrane protein 2.
    
   0.544
letm1
Leucine zipper-EF-hand containing transmembrane protein 1.
    
   0.544
gstcd
Glutathione S-transferase, C-terminal domain containing.
      
 0.542
aurkaip1
Aurora kinase A interacting protein 1.
      
 0.519
cep162
Centrosomal protein 162.
   
  
 0.501
ccdc124
Coiled-coil domain containing 124.
      
 0.498
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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