STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gtf3c4General transcription factor IIIC, polypeptide 4. (774 aa)    
Predicted Functional Partners:
GTF3C5
Uncharacterized protein.
   
 0.956
gtf3c2
General transcription factor 3C polypeptide 2.
    
 0.931
gtf3c3
General transcription factor IIIC, polypeptide 3.
   
 0.922
gtf3c1
B-block_TFIIIC domain-containing protein.
   
 0.920
polr3a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.811
LOC101066443
BRF1 RNA polymerase III transcription initiation factor subunit b.
     
 0.804
LOC101067672
TFIIB-type domain-containing protein.
     
 0.804
H2TXA3_TAKRU
Zinc finger protein 512.
    
 0.770
ZNF512B
Zinc finger protein 512B.
    
 0.770
ENSTRUP00000073004
Zinc finger protein 512.
    
 0.770
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: medium (46%) [HD]