Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
xkr6XK-related protein. (578 aa)    
Predicted Functional Partners:
CASP3
Caspase 3; Belongs to the peptidase C14A family.
    
 0.906
bsg
Basigin.
     
  0.900
mtmr9
Myotubularin related protein 9.
      
 0.763
H2RSU1_TAKRU
SH3 domain binding glutamate-rich protein.
      
 0.742
hmg20a
High mobility group 20A.
      
 0.631
ccm2
CCM2 scaffold protein.
      
 0.630
dlgap2
Discs, large (Drosophila) homolog-associated protein 2a.
      
 0.613
ppp4r3a
SMEK homolog 1, suppressor of mek1 (Dictyostelium).
      
 0.550
nkain2
Sodium/potassium transporting ATPase interacting 2.
      
 0.542
mfhas1
Malignant fibrous histiocytoma amplified sequence 1.
      
 0.518
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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