Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cse1lCSE1 chromosome segregation 1-like (yeast). (971 aa)    
Predicted Functional Partners:
XPO1
Exportin 1 (CRM1 homolog, yeast) b.
   
 0.995
xpo5
Exportin 5.
   
 0.984
xpo6
Exportin 6.
   
 0.984
kpna4
Importin subunit alpha; Belongs to the importin alpha family.
   
 0.975
kpna3
Importin subunit alpha; Belongs to the importin alpha family.
   
 0.975
kpna1
Importin subunit alpha; Belongs to the importin alpha family.
   
 0.975
xpo4
Exportin 4.
   
 
 0.972
xpo7
Exportin 7.
   
 
 0.971
ipo5
Karyopherin (importin) beta 3.
   
 
 0.962
ENSTRUP00000083097
Exportin 1 (CRM1 homolog, yeast) b.
   
 
 0.958
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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