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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101073553Phospholipase B-like; Putative phospholipase. (572 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2.
     
 0.564
Agmat
Agmatine ureohydrolase (agmatinase); Belongs to the arginase family.
      
 0.543
pif1
ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability.
      
 0.536
GRIK3
Glutamate ionotropic receptor kainate type subunit 3.
      
 0.530
gipc3
GIPC PDZ domain containing family, member 3.
      
 0.530
cd276
Uncharacterized protein.
      
 0.525
ENSTRUP00000053139
Anti_prolifrtn domain-containing protein.
      
 0.522
espn
Espin.
    
 0.488
LOC101067771
Syntaxin 1B; Belongs to the syntaxin family.
      
 0.463
LOC101079774
Regulator of G protein signaling 4.
      
 0.457
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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