Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101069674Phospholipase. (903 aa)    
Predicted Functional Partners:
pisd
Phosphatidylserine decarboxylase.
   
 0.671
LOC101076287
Ras homolog gene family, member Gd.
    
 0.580
LOC101073689
Ras homolog family member Gb.
    
 0.580
psph
Phosphoserine phosphatase.
    
 0.570
LOC101076147
Uncharacterized protein.
    
 0.559
LOC101070117
Ras homolog gene family, member Aa.
    
 0.559
LOC101064166
Uncharacterized protein.
    
 0.559
LOC101071942
Uncharacterized protein.
    
 0.559
LOC101077509
Ras homolog family member Ca.
    
 0.559
ENSTRUP00000047861
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.554
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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