STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNNC1Troponin C type 1b (slow). (161 aa)    
Predicted Functional Partners:
tnni1
Troponin I type 1a (skeletal, slow).
   
 0.993
tnnt2
Troponin T type 2a (cardiac).
   
 0.986
LOC101074122
Uncharacterized protein.
   
 0.984
LOC101074227
Si:rp71-17i16.4.
  
 
 
0.958
LOC101074449
Troponin C type 2 (fast).
  
 
 
0.957
LOC101068009
Troponin I4b, tandem duplicate 2.
   
 0.953
H2V1W2_TAKRU
Troponin I4b, tandem duplicate 2.
   
 0.953
TNNI2
Troponin I type 2b (skeletal, fast), tandem duplicate 1.
   
 0.920
LOC101076809
Uncharacterized protein.
   
 0.920
ENSTRUP00000042560
Troponin I type 2a (skeletal, fast), tandem duplicate 1.
   
 0.920
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.