Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101066489IgLON family member 5. (333 aa)    
Predicted Functional Partners:
dhdds
Alkyl transferase; Belongs to the UPP synthase family.
      
 0.888
usf2
Upstream transcription factor 2, c-fos interacting.
      
 0.728
ENSTRUP00000018373
Delta/notch-like EGF repeat containing.
   
 0.714
LOC101062466
Electron transfer flavoprotein subunit beta.
      
 0.624
ethe1
ETHE1 persulfide dioxygenase.
      
 0.618
ago3
Uncharacterized protein; Belongs to the argonaute family.
    
 
 0.616
tekt2
Tektin 2 (testicular).
    
 
 0.607
ncdn
Neurochondrin.
      
 0.604
olah
Oleoyl-ACP hydrolase.
    
 
 0.587
KLHL11
Kelch like family member 11.
      
 0.582
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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