Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
marveld2-2Occludin_ELL domain-containing protein. (133 aa)    
Predicted Functional Partners:
cdk9
Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.
    
 0.561
LOC101066033
Occludin a.
   
 0.508
ndufaf1
NADH:ubiquinone oxidoreductase complex assembly factor 1.
    
   0.489
eaf2
ELL associated factor 2.
    
 0.443
eaf1
ELL associated factor 1.
    
 0.443
LOC101061475
E3 ubiquitin-protein ligase.
    
 
 0.421
LOC101070007
E3 ubiquitin-protein ligase.
    
 
 0.421
LOC101073904
Tight junction protein 1b; Belongs to the MAGUK family.
   
 
 0.406
LOC101069449
Tight junction protein 1a; Belongs to the MAGUK family.
   
 
 0.406
LOC101065028
Si:ch211-191a24.4.
   
  
 0.401
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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