STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nek8NIMA-related kinase 8. (699 aa)    
Predicted Functional Partners:
ANKS6
Ankyrin repeat and sterile alpha motif domain containing 6.
    
 0.897
ENSTRUP00000085215
annotation not available
    
 0.897
LOC101066875
RPGR1_C domain-containing protein.
    
 
 0.889
anks3
Ankyrin repeat and sterile alpha motif domain containing 3.
    
 0.886
nphp3
Nephronophthisis 3.
    
 
 0.786
nek7
NIMA-related kinase 7.
    
 0.737
nphp1
Nephrocystin-1.
    
 
 0.733
ppm1k
Protein phosphatase, Mg2+/Mn2+ dependent, 1K.
    
 
 0.679
cdc25b
Cell division cycle 25B.
   
 0.659
ppp4r1
WRNPLPNID domain-containing protein.
     
 0.646
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.