Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
gstcdGlutathione S-transferase, C-terminal domain containing. (631 aa)    
Predicted Functional Partners:
Mrps28
Mitochondrial ribosomal protein S28.
   
  
 0.703
LOC101068455
Nuclear envelope integral membrane protein 1.
      
 0.698
H2T9W6_TAKRU
Microtubule crosslinking factor 1.
      
 0.611
cep85
Centrosomal protein 85.
      
 0.609
eefsec
Eukaryotic elongation factor, selenocysteine-tRNA-specific.
   
 0.595
map1lc3c
Microtubule-associated protein 1 light chain 3 gamma.
      
 0.567
LOC101079624
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
      
 0.553
LOC101064986
Coiled-coil domain containing 77.
      
 0.542
LOC115251127
Coiled-coil domain-containing protein 77-like.
      
 0.542
st3gal3
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
   
  
 0.522
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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