STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtss2MTSS I-BAR domain containing 2a. (774 aa)    
Predicted Functional Partners:
vac14
Vacuole morphology and inheritance protein 14.
 
  
 
 0.717
gosr2
Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.478
ewsr1
EWS RNA-binding protein 1b.
    
 
 0.451
arhgef37
Rho guanine nucleotide exchange factor (GEF) 37.
   
 
 0.448
cog4
Component of oligomeric golgi complex 4.
      
 0.444
fcsk
Fucose kinase.
      
 0.439
LOC101076529
RAB7a, member RAS oncogene family.
    
  0.431
LOC101061812
RAB7A, member RAS oncogene family.
    
  0.431
LOC101076067
Hematopoietic cell-specific Lyn substrate 1.
   
 0.422
LOC101076297
Golgin B1.
   
 0.422
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.