Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ccsCopper chaperone for superoxide dismutase. (270 aa)    
Predicted Functional Partners:
atp7a
ATPase copper transporting alpha.
  
 0.986
ENSTRUP00000075303
Superoxide dismutase 3, extracellular b.
  
0.951
Atox1
HMA domain-containing protein.
    
 
 0.944
sod1
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 0.943
ENSTRUP00000049598
Cytochrome c oxidase copper chaperone COX17.
    
 0.875
ppil3
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
   0.741
got1
Aspartate aminotransferase.
   
 
 0.701
prpf19
Pre-mRNA processing factor 19.
      
 0.672
sod2
Superoxide dismutase 2, mitochondrial.
  
  
 0.648
slc31a1
Solute carrier family 31 member 1.
    
 
 0.642
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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