STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gria1Glutamate receptor, ionotropic, AMPA 1a. (939 aa)    
Predicted Functional Partners:
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
  
0.822
cnih1
Cornichon family AMPA receptor auxiliary protein 1.
    
 0.733
cnih4
Cornichon family AMPA receptor auxiliary protein 4.
    
 0.729
LOC101076314
Cornichon family AMPA receptor auxiliary protein 3.
   
 0.711
LOC101074874
Cornichon family AMPA receptor auxiliary protein 2.
   
 0.711
cask
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.703
LOC101075022
Calcium channel, voltage-dependent, gamma subunit 8a.
    
 0.649
LOC101080049
Calcium channel, voltage-dependent, gamma subunit 8b.
    
 0.649
grip1
Glutamate receptor interacting protein 1.
   
 0.643
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.637
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.