close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101065208Usher syndrome 1C. (557 aa)    
Predicted Functional Partners:
LOC101077248
Usher syndrome 1Ga (autosomal recessive).
    
 0.918
H2V7V0_TAKRU
Uncharacterized protein.
   
 
 0.902
LOC101077154
Usher syndrome 1Gb (autosomal recessive).
    
 0.858
anks4b
Ankyrin repeat and sterile alpha motif domain containing 4B.
    
 0.858
cdhr2
Cadherin-related family member 2.
   
 
 0.856
LOC101065727
Protocadherin-related 15b.
   
 
 0.806
LOC101079017
Si:ch73-194h10.2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.763
PLEKHH3
Pleckstrin homology, MyTH4 and FERM domain containing H3.
   
 0.763
ENSTRUP00000056597
MyTH4 domain-containing protein.
   
 0.763
Myo15b
Myosin XVB.
   
 0.763
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.