Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
depdc7DEP domain containing 7, paralog a. (551 aa)    
Predicted Functional Partners:
KIAA1549L
Uncharacterized protein.
    
 
 0.646
dnajc24
Uncharacterized protein.
      
 0.638
kif26a
Kinesin family member 26Ab; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.552
ttc5
Tetratricopeptide repeat domain 5.
    
   0.488
usp37
Ubiquitin carboxyl-terminal hydrolase.
      
 0.476
pax4
Uncharacterized protein.
    
 
 0.467
LOC101068345
Uncharacterized protein.
    
 
 0.452
LOC105418160
Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters.
      
 0.443
acbd5
Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters.
      
 0.443
flrt3
Fibronectin leucine rich transmembrane 3.
      
 0.440
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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