STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bhlhe41Basic helix-loop-helix family, member e41. (427 aa)    
Predicted Functional Partners:
LOC101078561
Period circadian clock 3.
    
 0.685
PER2
Period circadian regulator 2.
    
 0.685
per1
Period circadian clock 1b.
    
 0.685
ENSTRUP00000063599
Uncharacterized protein.
    
 0.685
LOC101061913
Period circadian clock 2.
    
 0.685
LOC101077433
Nuclear factor, interleukin 3 regulated, member 5.
    
 0.613
LOC101077658
BZIP domain-containing protein.
    
 0.613
ENSTRUP00000054577
Nuclear factor, interleukin 3 regulated, member 4.
    
 0.613
LOC101062833
Nuclear factor, interleukin 3 regulated.
    
 0.613
LOC101073711
Uncharacterized protein.
    
 
 0.515
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.