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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101076860Protein tyrosine phosphatase receptor type Ea. (636 aa)    
Predicted Functional Partners:
ENSTRUP00000078624
Uncharacterized protein.
 
 
   0.908
grb2
Growth factor receptor-bound protein 2b.
   
 0.721
LOC101061204
Uncharacterized protein.
   
 0.721
il1rap
Interleukin 1 receptor accessory protein.
    
 0.654
pts
6-pyruvoyl tetrahydrobiopterin synthase.
    
 
 0.619
slitrk2
SLIT and NTRK-like family, member 2.
    
 0.582
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.543
LOC101061514
Leucine rich repeat and fibronectin type III domain containing 5b.
    
 0.522
LOC101069428
Leucine rich repeat and fibronectin type III domain containing 5a.
    
 0.522
LOC101078202
Tyrosine-protein kinase receptor.
   
 0.514
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.