Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc1a4Solute carrier family 1 member 4. (529 aa)    
Predicted Functional Partners:
slc7a5
Solute carrier family 7 member 5.
   
 
 0.743
mtr
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.631
nudcd1
Uncharacterized protein.
    
   0.624
rhoq
Ras homolog family member Q.
    
 0.596
ENSTRUP00000075806
Rho-related GTP-binding protein RhoQ-like.
    
 0.596
dbt
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.586
slc38a9
Solute carrier family 38 member 9.
      
 0.584
slc3a1
Solute carrier family 3 member 1.
   
 
 0.551
slc16a10
Solute carrier family 16 member 10.
      
 0.544
anapc15
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
     
 0.542
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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