Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
LOC101076818EMI domain-containing protein. (1145 aa)    
Predicted Functional Partners:
LOC115246434
Zgc:154055.
    
   0.760
mtmr9
Myotubularin related protein 9.
    
   0.760
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
 0.572
ak9
Adenylate kinase 9.
    
   0.521
wnt4
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 
 0.449
ENSTRUP00000066035
Elastin-like isoform X1.
      
 0.445
fut11
Alpha-(1,3)-fucosyltransferase 11; Probable fucosyltransferase.
     
  0.425
LOC101065873
Uncharacterized protein.
    
   0.418
ift20
Intraflagellar transport 20 homolog (Chlamydomonas).
    
   0.418
uso1
USO1 vesicle transport factor.
     
 0.416
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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