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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
marveld1MARVEL domain containing 1. (167 aa)    
Predicted Functional Partners:
telo2
TEL2, telomere maintenance 2, homolog (S. cerevisiae).
      
 0.568
LOC101075364
Reprimo-like.
      
 0.568
LOC101068299
Protein S100; Belongs to the S-100 family.
      
 0.568
LOC101080222
Polybromo 1.
      
 0.567
actr8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
      
 0.567
slf1
SMC5-SMC6 complex localization factor protein 1.
      
 0.567
gas2
Growth arrest-specific 2a.
   
  
 0.533
myoc
Myocilin.
      
 0.531
MYOC
Myocilin.
      
 0.531
fezf2
FEZ family zinc finger 2.
      
 0.450
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.