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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtmr14Myotubularin related protein 14. (663 aa)    
Predicted Functional Partners:
FIG4
FIG4 phosphoinositide 5-phosphatase.
   
 
 0.915
sacm1l
SAC1 like phosphatidylinositide phosphatase a.
     
 0.913
pikfyve
PIPK domain-containing protein.
     
 0.905
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
  0.900
LOC101062629
Si:dkey-266f7.9.
     
  0.900
bag3
Inositol polyphosphate-5-phosphatase F.
     
  0.900
inpp4b
Inositol polyphosphate-4-phosphatase type II B.
     
  0.900
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.711
LOC101063528
Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma b.
     
  0.705
LOC101079176
Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma a.
     
  0.705
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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