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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101061216PID domain-containing protein. (730 aa)    
Predicted Functional Partners:
nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
      
 0.657
PLEKHG1
Pleckstrin homology and RhoGEF domain containing G1.
      
 0.623
drp2
Dystrophin related protein 2.
      
 0.566
LOC101064488
Utrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.
      
 0.566
LOC101078265
Uncharacterized protein.
      
 0.566
DMD
Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.
      
 0.566
ENSTRUP00000075566
Uncharacterized protein.
      
 0.566
Dytn
Dystrotelin.
      
 0.566
amdhd1
Amidohydrolase domain containing 1.
      
 0.560
gda
Guanine deaminase isoform X1.
      
 0.560
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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