Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
c18h12orf66 | depdc5 | ENSTRUP00000053791 | ENSTRUP00000060910 | Si:ch211-125a15.1. | DEP domain containing 5. | 0.982 |
c18h12orf66 | itfg2 | ENSTRUP00000053791 | ENSTRUP00000037425 | Si:ch211-125a15.1. | Integrin alpha FG-GAP repeat containing 2. | 0.989 |
c18h12orf66 | kptn | ENSTRUP00000053791 | ENSTRUP00000015826 | Si:ch211-125a15.1. | Kaptin (actin binding protein). | 0.990 |
c18h12orf66 | mios | ENSTRUP00000053791 | ENSTRUP00000021399 | Si:ch211-125a15.1. | Missing oocyte, meiosis regulator, homolog (Drosophila). | 0.729 |
c18h12orf66 | nprl2 | ENSTRUP00000053791 | ENSTRUP00000034949 | Si:ch211-125a15.1. | NPR2 like, GATOR1 complex subunit. | 0.977 |
c18h12orf66 | nprl3 | ENSTRUP00000053791 | ENSTRUP00000071046 | Si:ch211-125a15.1. | NPR3-like, GATOR1 complex subunit. | 0.811 |
c18h12orf66 | sec13 | ENSTRUP00000053791 | ENSTRUP00000082220 | Si:ch211-125a15.1. | SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. | 0.636 |
c18h12orf66 | seh1l | ENSTRUP00000053791 | ENSTRUP00000073614 | Si:ch211-125a15.1. | SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. | 0.683 |
c18h12orf66 | wdr24 | ENSTRUP00000053791 | ENSTRUP00000052538 | Si:ch211-125a15.1. | WD repeat domain 24. | 0.977 |
c18h12orf66 | wdr59 | ENSTRUP00000053791 | ENSTRUP00000014089 | Si:ch211-125a15.1. | WD repeat domain 59. | 0.977 |
depdc5 | c18h12orf66 | ENSTRUP00000060910 | ENSTRUP00000053791 | DEP domain containing 5. | Si:ch211-125a15.1. | 0.982 |
depdc5 | itfg2 | ENSTRUP00000060910 | ENSTRUP00000037425 | DEP domain containing 5. | Integrin alpha FG-GAP repeat containing 2. | 0.986 |
depdc5 | kptn | ENSTRUP00000060910 | ENSTRUP00000015826 | DEP domain containing 5. | Kaptin (actin binding protein). | 0.981 |
depdc5 | mios | ENSTRUP00000060910 | ENSTRUP00000021399 | DEP domain containing 5. | Missing oocyte, meiosis regulator, homolog (Drosophila). | 0.999 |
depdc5 | nprl2 | ENSTRUP00000060910 | ENSTRUP00000034949 | DEP domain containing 5. | NPR2 like, GATOR1 complex subunit. | 0.999 |
depdc5 | nprl3 | ENSTRUP00000060910 | ENSTRUP00000071046 | DEP domain containing 5. | NPR3-like, GATOR1 complex subunit. | 0.999 |
depdc5 | sec13 | ENSTRUP00000060910 | ENSTRUP00000082220 | DEP domain containing 5. | SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. | 0.997 |
depdc5 | seh1l | ENSTRUP00000060910 | ENSTRUP00000073614 | DEP domain containing 5. | SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. | 0.997 |
depdc5 | wdr24 | ENSTRUP00000060910 | ENSTRUP00000052538 | DEP domain containing 5. | WD repeat domain 24. | 0.999 |
depdc5 | wdr59 | ENSTRUP00000060910 | ENSTRUP00000014089 | DEP domain containing 5. | WD repeat domain 59. | 0.999 |
page 1 of 6