STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101069713Leucine rich repeat containing 38a. (298 aa)    
Predicted Functional Partners:
asb16
Ankyrin repeat and SOCS box containing 16.
    
 0.609
lrrc20
Leucine rich repeat containing 20.
      
 0.597
IQCA1L
ATPase_AAA_core domain-containing protein.
    
 
 0.547
LOC101077156
Ankyrin repeat and SOCS box-containing 12a.
    
 0.540
LRRC30
Leucine rich repeat containing 30.
   
  
 0.530
LOC101079300
Leucine rich repeat containing 14B.
      
 0.516
osbpl7
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.511
osbpl6
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.511
tceanc2
Uncharacterized protein.
      
 0.510
cpn1
Carboxypeptidase N, polypeptide 1.
     
  0.500
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.