Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
baz1bBromodomain adjacent to zinc finger domain, 1B. (1561 aa)    
Predicted Functional Partners:
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.998
tbl2
MYB binding protein (P160) 1a.
   
 0.977
sf3b1
Splicing factor 3b, subunit 1.
   
 0.974
ddx21
DEAD (Asp-Glu-Ala-Asp) box helicase 21.
   
 0.970
LOC101062688
DEK_C domain-containing protein.
   
 0.966
myo1c
Myosin Ic, paralog b; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
  0.925
LOC101068929
TH1 domain-containing protein.
    
  0.925
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
   
0.896
pole3
Polymerase (DNA directed), epsilon 3 (p17 subunit).
    
 0.895
LOC101067848
Chromatin accessibility complex subunit 1.
   
 0.835
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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