STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ICA1LIslet cell autoantigen 1-like. (548 aa)    
Predicted Functional Partners:
rab2a
RAB2A, member RAS oncogene family.
    
 
 0.572
ENSTRUP00000013870
Protein interacting with prkca 1.
    
 
 0.536
LOC101074890
Protein interacting with prkca 1.
    
 
 0.536
dnajc27
DnaJ (Hsp40) homolog, subfamily C, member 27.
    
 
 0.443
ccdc186
Si:ch211-225b10.4.
      
 0.404
rundc1
RUN domain containing 1.
    
 
 0.402
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.