Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC105418219Apolipoprotein L, 1. (315 aa)    
Predicted Functional Partners:
Fancm
ERCC4 domain-containing protein.
    
 0.500
ENSTRUP00000056463
Si:ch211-66e2.5.
  
  0.497
LOC101063578
FABP domain-containing protein.
     
 0.495
LOC101068355
Zgc:113337.
  
     0.492
bicc1
BicC family RNA binding protein 1a.
      
 0.478
LOC101077870
Bicaudal C homolog 2.
      
 0.478
LOC101072911
Sidekick cell adhesion molecule 2a.
    
 0.450
SDK1
Sidekick cell adhesion molecule 1.
    
 0.450
Map3k19
Mitogen-activated protein kinase kinase kinase 19 isoform X1.
    
 
 0.442
LOC101080202
Info solute carrier family 35 member F2, like.
      
 0.425
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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