Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
klhl29Kelch-like family member 29. (872 aa)    
Predicted Functional Partners:
kbtbd8
Kelch repeat and BTB (POZ) domain containing 8.
    
   0.916
klhl21
Kelch-like family member 21.
    
 
 0.632
fbxo46
F-box only protein 46.
      
 0.631
UBR1
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
  
 0.560
LOC101071748
Uncharacterized protein.
      
 0.511
abhd15
Abhydrolase domain containing 15a.
      
 0.511
bbs9
Bardet-Biedl syndrome 9.
    
 0.485
ubxn7
UBX domain protein 7.
    
  0.484
UBXN7
UBX domain protein 7.
    
  0.484
asb6
Ankyrin repeat and SOCS box containing 6.
    
 0.481
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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