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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101073808Oxysterol-binding protein; Belongs to the OSBP family. (467 aa)    
Predicted Functional Partners:
ADRM1
Adhesion regulating molecule 1.
 
    
 0.752
LOC101076529
RAB7a, member RAS oncogene family.
    
 0.729
LOC101061812
RAB7A, member RAS oncogene family.
    
 0.729
mospd2
Motile sperm domain containing 2.
    
 
 0.594
LOC101062767
Rab interacting lysosomal protein.
   
 0.569
RILPL1
Rab interacting lysosomal protein like 1.
   
 0.500
LOC101068724
RILP-like protein 1.
   
 0.500
LOC101078863
VAMP (vesicle-associated membrane protein)-associated protein B and C.
    
 
 0.426
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 
 0.426
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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